chemaxon automapper tool Search Results


chemaxon automapper tool  (ChemAxon LLC)
90
ChemAxon LLC chemaxon automapper tool
Chemaxon Automapper Tool, supplied by ChemAxon LLC, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/chemaxon automapper tool/product/ChemAxon LLC
Average 90 stars, based on 1 article reviews
chemaxon automapper tool - by Bioz Stars, 2026-04
90/100 stars
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automapper user's guide  (ChemAxon LLC)
90
ChemAxon LLC automapper user's guide
Automapper User's Guide, supplied by ChemAxon LLC, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/automapper user's guide/product/ChemAxon LLC
Average 90 stars, based on 1 article reviews
automapper user's guide - by Bioz Stars, 2026-04
90/100 stars
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automapper 5.0.1  (ChemAxon LLC)
90
ChemAxon LLC automapper 5.0.1
Atom mapping predictions for the enolase reaction. All six compared algorithms returned an accurate atom mapping but included different types of additional information. CLCA and MWED identify equivalent atoms in the reactants ( blue ). DREAM and <t>AutoMapper</t> map hydrogen atoms ( yellow ). RDT, CLCA, ICMAP and MWED all identify reaction centres ( green ). Unlike the other three algorithms, MWED does not identify reaction centres by adding information to the bonds that break and form. Instead, it assigns different colours to the molecular substructures (moieties) that break apart or bind together. The atom mapped reactions are visualised with MarvinView (ChemAxon, Budapest, Hungary), which accepts the RXN and SMILES formats as input
Automapper 5.0.1, supplied by ChemAxon LLC, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/automapper 5.0.1/product/ChemAxon LLC
Average 90 stars, based on 1 article reviews
automapper 5.0.1 - by Bioz Stars, 2026-04
90/100 stars
  Buy from Supplier
desktop application marvinsketch  (ChemAxon LLC)
90
ChemAxon LLC desktop application marvinsketch
Atom mapping predictions for the enolase reaction. All six compared algorithms returned an accurate atom mapping but included different types of additional information. CLCA and MWED identify equivalent atoms in the reactants ( blue ). DREAM and <t>AutoMapper</t> map hydrogen atoms ( yellow ). RDT, CLCA, ICMAP and MWED all identify reaction centres ( green ). Unlike the other three algorithms, MWED does not identify reaction centres by adding information to the bonds that break and form. Instead, it assigns different colours to the molecular substructures (moieties) that break apart or bind together. The atom mapped reactions are visualised with MarvinView (ChemAxon, Budapest, Hungary), which accepts the RXN and SMILES formats as input
Desktop Application Marvinsketch, supplied by ChemAxon LLC, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/desktop application marvinsketch/product/ChemAxon LLC
Average 90 stars, based on 1 article reviews
desktop application marvinsketch - by Bioz Stars, 2026-04
90/100 stars
  Buy from Supplier
chemical informatics tools  (ChemAxon LLC)
90
ChemAxon LLC chemical informatics tools
Atom mapping predictions for the enolase reaction. All six compared algorithms returned an accurate atom mapping but included different types of additional information. CLCA and MWED identify equivalent atoms in the reactants ( blue ). DREAM and <t>AutoMapper</t> map hydrogen atoms ( yellow ). RDT, CLCA, ICMAP and MWED all identify reaction centres ( green ). Unlike the other three algorithms, MWED does not identify reaction centres by adding information to the bonds that break and form. Instead, it assigns different colours to the molecular substructures (moieties) that break apart or bind together. The atom mapped reactions are visualised with MarvinView (ChemAxon, Budapest, Hungary), which accepts the RXN and SMILES formats as input
Chemical Informatics Tools, supplied by ChemAxon LLC, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/chemical informatics tools/product/ChemAxon LLC
Average 90 stars, based on 1 article reviews
chemical informatics tools - by Bioz Stars, 2026-04
90/100 stars
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infochem-map icmap  (InfoChem GmbH)
90
InfoChem GmbH infochem-map icmap
Atom mapping predictions for the enolase reaction. All six compared algorithms returned an accurate atom mapping but included different types of additional information. CLCA and MWED identify equivalent atoms in the reactants ( blue ). DREAM and <t>AutoMapper</t> map hydrogen atoms ( yellow ). RDT, CLCA, ICMAP and MWED all identify reaction centres ( green ). Unlike the other three algorithms, MWED does not identify reaction centres by adding information to the bonds that break and form. Instead, it assigns different colours to the molecular substructures (moieties) that break apart or bind together. The atom mapped reactions are visualised with MarvinView (ChemAxon, Budapest, Hungary), which accepts the RXN and SMILES formats as input
Infochem Map Icmap, supplied by InfoChem GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/infochem-map icmap/product/InfoChem GmbH
Average 90 stars, based on 1 article reviews
infochem-map icmap - by Bioz Stars, 2026-04
90/100 stars
  Buy from Supplier

Image Search Results


Atom mapping predictions for the enolase reaction. All six compared algorithms returned an accurate atom mapping but included different types of additional information. CLCA and MWED identify equivalent atoms in the reactants ( blue ). DREAM and AutoMapper map hydrogen atoms ( yellow ). RDT, CLCA, ICMAP and MWED all identify reaction centres ( green ). Unlike the other three algorithms, MWED does not identify reaction centres by adding information to the bonds that break and form. Instead, it assigns different colours to the molecular substructures (moieties) that break apart or bind together. The atom mapped reactions are visualised with MarvinView (ChemAxon, Budapest, Hungary), which accepts the RXN and SMILES formats as input

Journal: Journal of Cheminformatics

Article Title: Comparative evaluation of atom mapping algorithms for balanced metabolic reactions: application to Recon 3D

doi: 10.1186/s13321-017-0223-1

Figure Lengend Snippet: Atom mapping predictions for the enolase reaction. All six compared algorithms returned an accurate atom mapping but included different types of additional information. CLCA and MWED identify equivalent atoms in the reactants ( blue ). DREAM and AutoMapper map hydrogen atoms ( yellow ). RDT, CLCA, ICMAP and MWED all identify reaction centres ( green ). Unlike the other three algorithms, MWED does not identify reaction centres by adding information to the bonds that break and form. Instead, it assigns different colours to the molecular substructures (moieties) that break apart or bind together. The atom mapped reactions are visualised with MarvinView (ChemAxon, Budapest, Hungary), which accepts the RXN and SMILES formats as input

Article Snippet: Six academic and commercially available atom mapping algorithms were included in our evaluation Reaction Decoder Tool (RDT, [ ]), Determination of Reaction Mechanisms (DREAM, [ ]), AutoMapper 5.0.1 (AutoMapper, [ ], ChemAxon, Budapest, Hungary), Canonical Labeling for Clique Approximation (CLCA, [ ]), Minimum Weighted Edit-Distance (MWED, [ ]) within Pathway Tools, and InfoChem-Map (ICMAP, [ ], InfoChem, Munich, Germany).

Techniques:

Number of evaluated reactions per algorithm

Journal: Journal of Cheminformatics

Article Title: Comparative evaluation of atom mapping algorithms for balanced metabolic reactions: application to Recon 3D

doi: 10.1186/s13321-017-0223-1

Figure Lengend Snippet: Number of evaluated reactions per algorithm

Article Snippet: Six academic and commercially available atom mapping algorithms were included in our evaluation Reaction Decoder Tool (RDT, [ ]), Determination of Reaction Mechanisms (DREAM, [ ]), AutoMapper 5.0.1 (AutoMapper, [ ], ChemAxon, Budapest, Hungary), Canonical Labeling for Clique Approximation (CLCA, [ ]), Minimum Weighted Edit-Distance (MWED, [ ]) within Pathway Tools, and InfoChem-Map (ICMAP, [ ], InfoChem, Munich, Germany).

Techniques:

Comparison of technical features

Journal: Journal of Cheminformatics

Article Title: Comparative evaluation of atom mapping algorithms for balanced metabolic reactions: application to Recon 3D

doi: 10.1186/s13321-017-0223-1

Figure Lengend Snippet: Comparison of technical features

Article Snippet: Six academic and commercially available atom mapping algorithms were included in our evaluation Reaction Decoder Tool (RDT, [ ]), Determination of Reaction Mechanisms (DREAM, [ ]), AutoMapper 5.0.1 (AutoMapper, [ ], ChemAxon, Budapest, Hungary), Canonical Labeling for Clique Approximation (CLCA, [ ]), Minimum Weighted Edit-Distance (MWED, [ ]) within Pathway Tools, and InfoChem-Map (ICMAP, [ ], InfoChem, Munich, Germany).

Techniques: Comparison

Comparison of advanced features

Journal: Journal of Cheminformatics

Article Title: Comparative evaluation of atom mapping algorithms for balanced metabolic reactions: application to Recon 3D

doi: 10.1186/s13321-017-0223-1

Figure Lengend Snippet: Comparison of advanced features

Article Snippet: Six academic and commercially available atom mapping algorithms were included in our evaluation Reaction Decoder Tool (RDT, [ ]), Determination of Reaction Mechanisms (DREAM, [ ]), AutoMapper 5.0.1 (AutoMapper, [ ], ChemAxon, Budapest, Hungary), Canonical Labeling for Clique Approximation (CLCA, [ ]), Minimum Weighted Edit-Distance (MWED, [ ]) within Pathway Tools, and InfoChem-Map (ICMAP, [ ], InfoChem, Munich, Germany).

Techniques: Comparison